Articles By Keyword

. "Meta-analysis of gene-level associations for rare variants based on single-variant statistics.." Am J Hum Genet. 2013;93(2):236-48. Pub Med
. "TEAM: Efficient two-locus epistasis tests in human genome-wide association study.." Bioinformatics. 2010;26(12):i217-27. Pub Med
. "Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences.." Bioinformatics. 2019;35(12):2084-2092. Pub Med
. "DiNAMIC: A method to identify recurrent DNA copy number aberrations in tumors.." Bioinformatics. 2011;27(5):678-85. Pub Med
. "bcSeq: an R package for fast sequence mapping in high-throughput shRNA and CRISPR screens.." Bioinformatics. 2018;34(20):3581-3583. Pub Med
. "A variable selection method for genome-wide association studies.." Bioinformatics. 2011;27(1):1-8. Pub Med
. "Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny.." Bioinformatics. 2018;34(12):2126-2128. Pub Med
. "MASS: Meta-analysis of score statistics for sequencing studies.." Bioinformatics. 2013;29(14):1803-5. Pub Med
. "Biclustering via sparse clustering.." Biometrics. 2020;76(1):348-358. Pub Med
. "Empirical pathway analysis, without permutation.." Biostatistics. 2013;14(3):573-85. Pub Med
. "Incorporating covariates in skewed functional data models.." Biostatistics. 2015;16(3):413-26. Pub Med
. "Hypothesis testing at the extremes: fast and robust association for high-throughput data.." Biostatistics. 2015;16(3):611-25. Pub Med
. "Exploiting expression patterns across multiple tissues to map expression quantitative trait loci.." BMC Bioinformatics. 2016;17():257. Pub Med
. "Efficient estimation of grouped survival models.." BMC Bioinformatics. 2019;20(1):269. Pub Med
. "permGPU: Using graphics processing units in RNA microarray association studies.." BMC Bioinformatics. 2010;11():329. Pub Med
. "PreMeta: A tool to facilitate meta-analysis of rare-variant associations.." BMC Genomics. 2017;18(1):160. Pub Med
. "Statistical considerations for analysis of microarray experiments.." Clin Transl Sci. 2011;4(6):466-77. Pub Med
. "CRM2DIM: A SAS macro for implementing the dual-agent Bayesian continual reassessment method.." Comput Methods Programs Biomed. 2019;176():211-223. Pub Med
. "Swimming downstream: Statistical analysis of differential transcript usage following Salmon quantification.." F1000Res. 2018;7():952. Pub Med
. "Meta-analysis of sequencing studies with heterogeneous genetic associations.." Genet Epidemiol. 2014;38(5):389-401. Pub Med
. "A fast multiple-kernel method with applications to detect gene-environment interaction.." Genet Epidemiol. 2015;39(6):456-68. Pub Med
. "Analysis of untyped SNPs: Maximum likelihood and imputation methods.." Genet Epidemiol. 2010;34(8):803-15. Pub Med
. "Complete effect-profile assessment in association studies with multiple genetic and multiple environmental factors.." Genet Epidemiol. 2015;39(2):122-33. Pub Med
. "Power and sample size calculations for SNP association studies with censored time-to-event outcomes.." Genet Epidemiol. 2012;36(6):538-48. Pub Med
. "Rapid and robust resampling-based multiple-testing correction with application in a genome-wide expression quantitative trait loci study.." Genetics. 2012;190(4):1511-20. Pub Med
. "I-Boost: An integrative boosting approach for predicting survival time with multiple genomics platforms.." Genome Biol. 2019;20(1):52. Pub Med
. "Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications.." Genome Biol. 2018;19(1):24. Pub Med
. "SynthEx: a synthetic-normal-based DNA sequencing tool for copy number alteration detection and tumor heterogeneity profiling.." Genome Biol. 2017;18(1):66. Pub Med
. "Missing data in clinical studies: Issues and methods.." J Clin Oncol. 2012;30(26):3297-303. Pub Med
. "Tximeta: Reference sequence checksums for provenance identification in RNA-seq.." PLoS Comput Biol. 2020;16(2):e1007664. Pub Med
. "SNPpy--database management for SNP data from genome wide association studies.." PLoS One. 2011;6(10):e24982. Pub Med
. "Joint modeling of survival and longitudinal non-survival data: current methods and issues. Report of the DIA Bayesian joint modeling working group.." Stat Med. 2015;34(14):2181-95. Pub Med
. "Bayesian analysis on meta-analysis of case-control studies accounting for within-study correlation.." Stat Methods Med Res. 2015;24(6):836-55. Pub Med
. "SGPP: Spatial Gaussian predictive process models for neuroimaging data.." Neuroimage. 2014;89():70-80. Pub Med
. "Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis.." PLoS Comput Biol. 2020;16(5):e1007797. Pub Med
. "Spatial regression with covariate measurement error: A semiparametric approach.." Biometrics. 2016;72(3):678-86. Pub Med
. "Bayesian spatial transformation models with applications in neuroimaging data.." Biometrics. 2013;69(4):1074-83. Pub Med
. "Quantifying center of pressure variability in chondrodystrophoid dogs.." Vet J. 2017;226():26-31. Pub Med
. "Increase in speech recognition due to linguistic mismatch between target and masker speech: monolingual and simultaneous bilingual performance.." J Speech Lang Hear Res. 2014;57(3):1089-97. Pub Med
. "Increase in speech recognition due to linguistic mismatch between target and masker speech: monolingual and simultaneous bilingual performance.." J Speech Lang Hear Res. 2014;57(3):1089-97. Pub Med
. "Intergenerational response to the endocrine disruptor vinclozolin is influenced by maternal genotype and crossing scheme.." Reprod Toxicol. 2018;78():9-19. Pub Med
. "Intergenerational response to the endocrine disruptor vinclozolin is influenced by maternal genotype and crossing scheme.." Reprod Toxicol. 2018;78():9-19. Pub Med
. "Genomewide meta-analysis validates a role for S1PR1 in microtubule targeting agent-induced sensory peripheral neuropathy.." Clin Pharmacol Ther. 2020;108(3):625-634. Pub Med
. "Time course and prognostic value of serum GFAP, pNFH, and S100β concentrations in dogs with complete spinal cord injury because of intervertebral disc extrusion.." J Vet Intern Med. 2019;33(2):726-734. Pub Med
. "Quantifying center of pressure variability in chondrodystrophoid dogs.." Vet J. 2017;226():26-31. Pub Med
. "Age and African-American race impact the validity and reliability of the asthma control test in persistent asthmatics.." Respir Res. 2018;19(1):152. Pub Med
. "Biomarker threshold adaptive designs for survival endpoints.." J Biopharm Stat. 2018;28(6):1038-1054. Pub Med
. "Improved doubly robust estimation when data are monotonely coarsened, with application to longitudinal studies with dropout.." Biometrics. 2011;67(2):536-45. Pub Med
. "Doubly-robust estimators of treatment-specific survival distributions in observational studies with stratified sampling.." Biometrics. 2013;69(4):830-9. Pub Med
. "Bayesian methods in clinical trials: A Bayesian analysis of ECOG trials E1684 and E1690.." BMC Med Res Methodol. 2012;12():183. Pub Med