Articles By Keyword

. "permGPU: Using graphics processing units in RNA microarray association studies.." BMC Bioinformatics. 2010;11():329. Pub Med
. "Multiple testing for gene sets from microarray experiments.." BMC Bioinformatics. 2011;12():209. Pub Med
. "PreMeta: A tool to facilitate meta-analysis of rare-variant associations.." BMC Genomics. 2017;18(1):160. Pub Med
. "Meta-analysis of sequencing studies with heterogeneous genetic associations.." Genet Epidemiol. 2014;38(5):389-401. Pub Med
. "Robust kernel association testing (RobKAT).." Genet Epidemiol. 2020;44(3):272-282. Pub Med
. "Across-platform imputation of DNA methylation levels incorporating nonlocal information using penalized functional regression.." Genet Epidemiol. 2016;40(4):333-40. Pub Med
. "On the substructure controls in rare variant analysis: Principal components or variance components?." Genet Epidemiol. 2018;42(3):276-287. Pub Med
. "A simple and accurate method to determine genomewide significance for association tests in sequencing studies.." Genet Epidemiol. 2019;43(4):365-372. Pub Med
. "Reexamining dis/similarity-based tests for rare-variant association with case-control samples.." Genetics. 2018;209(1):105-113. Pub Med
. "Predicting Alzheimer's disease using combined imaging-whole genome SNP data.." J Alzheimers Dis. 2015;46(3):695-702. Pub Med
. "Pharmacogenomics as a risk mitigation strategy for chemotherapeutic cardiotoxicity.." Pharmacogenomics. 2013;14(2):205-13. Pub Med
. "Identifying individual risk rare variants using protein structure guided local tests (POINT).." PLoS Comput Biol. 2019;15(2):e1006722. Pub Med
. "Rare variants association analysis in large-scale sequencing studies at the single locus level.." PLoS Comput Biol. 2016;12(6):e1004993. Pub Med
. "Secondary analysis of case-control association studies: Insights on weighting-based inference motivate a new specification test.." Stat Med. 2020;39(22):2869-2882. Pub Med
. "Incorporating functional information in tests of excess De Novo mutational load.." Am J Hum Genet. 2015;97(2):272-83. Pub Med
. "A general framework for detecting disease associations with rare variants in sequencing studies.." Am J Hum Genet. 2011;89(3):354-67. Pub Med
. "Integrative analysis of sequencing and array genotype data for discovering disease associations with rare mutations.." Proc Natl Acad Sci U S A. 2015;112(4):1019-24. Pub Med
. "SynthEx: a synthetic-normal-based DNA sequencing tool for copy number alteration detection and tumor heterogeneity profiling.." Genome Biol. 2017;18(1):66. Pub Med
. "Associating somatic mutations to clinical outcomes: a pan-cancer study of survival time.." Genome Med. 2019;11(1):37. Pub Med
. "A new method for detecting associations with rare copy-number variants.." PLoS Genet. 2015;11(10):e1005403. Pub Med
. "A genome-wide association study identifies novel loci for paclitaxel-induced sensory peripheral neuropathy in CALGB 40101.." Clin Cancer Res. 2012;18(18):5099-109. Pub Med
. "A general framework for association tests with multivariate traits in large-scale genomics studies.." Genet Epidemiol. 2013;37(8):759-67. Pub Med
. "Genome-wide association study identifies five new schizophrenia loci.." Nat Genet. 2011;43(10):969-76. Pub Med
. "Studying gene and gene-environment effects of uncommon and common variants on continuous traits: a marker-set approach using gene-trait similarity regression.." Am J Hum Genet. 2011;89(2):277-88. Pub Med
. "Statistical considerations for analysis of microarray experiments.." Clin Transl Sci. 2011;4(6):466-77. Pub Med
. "Multivariate phenotype association analysis by marker-set kernel machine regression.." Genet Epidemiol. 2012;36(7):686-95. Pub Med
. "Inference on phenotype-specific effects of genes using multivariate kernel machine regression.." Genet Epidemiol. 2018;42(1):64-79. Pub Med
. "Functional-mixed effects models for candidate genetic mapping in imaging genetic studies.." Genet Epidemiol. 2014;38(8):680-91. Pub Med
. "Rapid and robust resampling-based multiple-testing correction with application in a genome-wide expression quantitative trait loci study.." Genetics. 2012;190(4):1511-20. Pub Med
. "Bayesian longitudinal low-rank regression models for imaging genetic data from longitudinal studies.." Neuroimage. 2017;149():305-322. Pub Med
. "Cancer pharmacogenomics: early promise, but concerted effort needed.." Science. 2013;339(6127):1563-6. Pub Med
. "Genome analysis and pleiotropy assessment using causal networks with loss of function mutation and metabolomics.." BMC Genomics. 2019;20(1):395. Pub Med
. "Common variants in psychiatric risk genes predict brain structure at birth.." Cereb Cortex. 2014;24(5):1230-46. Pub Med
. "A genome-wide association study identifies novel loci for paclitaxel-induced sensory peripheral neuropathy in CALGB 40101.." Clin Cancer Res. 2012;18(18):5099-109. Pub Med
. "Pathway-based identification of SNPs predictive of survival.." Eur J Hum Genet. 2011;19(6):704-9. Pub Med
. "Complete effect-profile assessment in association studies with multiple genetic and multiple environmental factors.." Genet Epidemiol. 2015;39(2):122-33. Pub Med
. "Power and sample size calculations for SNP association studies with censored time-to-event outcomes.." Genet Epidemiol. 2012;36(6):538-48. Pub Med
. "Genome-wide association study identifies five new schizophrenia loci.." Nat Genet. 2011;43(10):969-76. Pub Med
. "Identifying individual risk rare variants using protein structure guided local tests (POINT).." PLoS Comput Biol. 2019;15(2):e1006722. Pub Med
. "Rare variants association analysis in large-scale sequencing studies at the single locus level.." PLoS Comput Biol. 2016;12(6):e1004993. Pub Med
. "Association test using Copy Number Profile Curves (CONCUR) enhances power in rare copy number variant analysis.." PLoS Comput Biol. 2020;16(5):e1007797. Pub Med
. "A new method for detecting associations with rare copy-number variants.." PLoS Genet. 2015;11(10):e1005403. Pub Med
. "Bayesian analysis on meta-analysis of case-control studies accounting for within-study correlation.." Stat Methods Med Res. 2015;24(6):836-55. Pub Med
. "Meta-analysis of gene-level associations for rare variants based on single-variant statistics.." Am J Hum Genet. 2013;93(2):236-48. Pub Med
. "Meta-analysis for discovering rare-variant associations: Statistical methods and software programs.." Am J Hum Genet. 2015;97(1):35-53. Pub Med
. "MASS: Meta-analysis of score statistics for sequencing studies.." Bioinformatics. 2013;29(14):1803-5. Pub Med
. "Exploiting expression patterns across multiple tissues to map expression quantitative trait loci.." BMC Bioinformatics. 2016;17():257. Pub Med
. "PreMeta: A tool to facilitate meta-analysis of rare-variant associations.." BMC Genomics. 2017;18(1):160. Pub Med
. "Common variants in psychiatric risk genes predict brain structure at birth.." Cereb Cortex. 2014;24(5):1230-46. Pub Med
. "A general framework for association tests with multivariate traits in large-scale genomics studies.." Genet Epidemiol. 2013;37(8):759-67. Pub Med